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Autoren:
Verlag:
UTB Weitere Titel dieses Verlages anzeigen
Inhaltsverzeichnis | ||
Vorwort | 7 | |
1 Das Leben und seine Bestand- | ||
teile | 11 | |
1.1 | Der Aufbau von DNA und RNA | 13 |
1.2 | Der genetische Code | 16 |
1.3 | Die Gene | 17 |
1.4 | Die Proteine | 22 |
1.5 | Die Zelle | 27 |
2 | Grundlagen der Arbeit im Labor | 29 |
2.1 | Wasser | 30 |
2.2 | Messung des pH-Wertes | 31 |
2.3 | Puffer | 32 |
2.4 | Waagen | 33 |
2.5 | Mikropipetten | 34 |
2.6 | Gefäße im Labor | 36 |
2.7 | Zentrifugen | 36 |
2.8 | Mischen und Konzentrieren | 40 |
2.9 | Konzentrieren | 41 |
2.10 | Pufferwechsel | 42 |
2.11 | Proben-Lagerung | 42 |
2.12 | Steriles Arbeiten | 43 |
2.13 Die kleinen Freunde - Pflege und | ||
Aufzucht von Escherichia coli | 45 | |
2.14 | Der Aufschluss von Geweben | 50 |
3 | Aufreinigung von Nukleinsäuren | 53 |
3.1 Gegenspieler erfolgreicher DNA- und | ||
RNA-Isolationen | 55 | |
3.2 | Extraktion von Nukleinsäuren | 58 |
3.3 | Die weitere Aufreinigung der DNA | 59 |
3.4 Einige ausgewählte | ||
DNA-Aufreinigungsmethoden | 66 | |
3.5 | Die Isolation von RNA | 71 |
3.6 | Übersicht über den Einsatz von Kits | 74 |
3.7 Tipps zum Erzielen hoher Ausbeuten | ||
bei der Isolation von Nukleinsäuren | 74 | |
3.8 | Quantifizierung von Nukleinsäuren | 75 |
4 | Polymerase Kettenreaktion | 79 |
4.1 Prinzip der Polymerase-Ketten- | ||
reaktion | 81 | |
4.2 | Die Komponenten der PCR | 81 |
4.3 | Geräte für die PCR | 90 |
4.4 | Die Standard-PCR | 91 |
4.5 | Ausgewählte PCR-Methoden | 91 |
4.6 | Anwendungen der PCR | 100 |
4.7 | Optimierung der PCR-Reaktion | 101 |
5 | Klonieren für Einsteiger | 103 |
5.1 | Restriktionsenzyme | 105 |
5.2 | Ligation | 113 |
5.3 | Dephosphorylierung | 115 |
5.4 | Die Transformation von E. coli | 117 |
5.5 | Der Weg zum Monierten Gen | 119 |
5.6 Der ungerichtete Einbau einer | ||
amplifizierten DNA in einen Vektor | 119 | |
5.7 Der gerichtete Einbau von DNA | ||
in einen Vektor | 122 | |
5.8 Ligase-unabhängige | ||
Klonierungssysteme | 124 | |
5.9 | Wenn es mal nicht klappt | 125 |
6 | Vektoren | 127 |
6.1 | Plasmide | 129 |
6.2 | Klonierungsplasmide | 132 |
6.3 | Rekombinase-basierte Klonierung | 136 |
6.4 | Expressionsplasmide | 139 |
6.5 | Reportergene | 143 |
6.6 | Phagen | 146 |
6.7 | Phagemide | 147 |
6.8 | Shuttle-Vektoren | 147 |
6.9 Künstliche Chromosomen: BACs, | ||
PACs und YACs | 148 | |
6.10 Hefen als Klonierungs- und | ||
Expressionssystem | 149 | |
.11 | Die Transformation von Pflanzen | 151 |
.12 Die Transformation von Säugetieren | ||
und tierischen Zellkulturen | 153 | |
7 Elektrophorese von | ||
Nukleinsäuren | 157 | |
7.1 Agarose-Gelelektrophorese | ||
von DNA | 159 | |
7.2 | Die Detektion der DNA im Gel | 164 |
7.3 | Präparative Agarosegele | 165 |
7.4 Auftrennen von RNA im | ||
Agarosegel | 167 | |
7.5 Fehlersuche bei der Agarose- | ||
Gelelektrophorese | 168 | |
8 | Proteinaufreinigung | 171 |
8.1 | Homogenisation | 175 |
8.2 | Extraktion von Proteinen | 177 |
8.3 | Dialyse und Konzentrierung | 181 |
8.4 | Weitere Aufreinigungsschritte | 183 |
8.5 | Quantifizierung von Proteinen | 186 |
8.6 Aufreinigungsverfahren für | ||
getaggte Proteine aus E. coli | 189 | |
9 Gelelektrophorese von | ||
Proteinen | 195 | |
9.1 Die Polyacrylamid-Gelelektrophorese | ||
(PAGE) | 197 | |
9.2 | Die denaturierende SDS-PAGE | 197 |
9.3 | Das Färben der Gele | 206 |
9.4 Weitere Elektrophoreseverfahren | ||
für Proteine | 208 | |
9.5 | Western Blotting | 211 |
9.6 | Wenn es mal nicht klappt | 214 |
10 Immunbiochemische | ||
Methoden | 217 | |
10.1 | Antikörper | 219 |
10.2 Prinzipien immunbiochemischer | ||
Verfahren | 223 | |
10.3 Spezifische und unspezifische | ||
Bindungen | 229 | |
10.4 | Immunbiochemische Verfahren | 230 |
10.5 | ELISA | 230 |
10.6 | Immunfärbung nach Western Blot | 235 |
10.7 | Immunoaffinitätschromatographie | 237 |
10.8 Weitere Antikörper-basierte | ||
Methoden | 239 | |
10.9 | Wenn es mal nicht klappt | 240 |
11 Molekularbiologie für | ||
Fortgeschrittene | 243 | |
11.1 | DNA-Sequenzierung | 245 |
11.2 | Bioinformatische Sequenzanalyse | 248 |
11.3 Der Einsatz der Bioinformatik für | ||
die Klonierung von DNA | 250 | |
11.4 Vollständige Sequenzen durch | ||
3 | ' RACE-PCR und 5' RACE-PCR | 251 |
11.5 | Stammsammlungen | 253 |
11.6 Identifizierung von Nukleinsäuren | ||
durch Hybridisierung | 253 | |
11.7 | DNA-Chips oder Microarrays | 255 |
11.8 | Veränderung von Nukleinsäuren | 256 |
11.9 | Synthetische Gene | 260 |
Anhang | ||
Al Sicherheit im Labor | 262 | |
A2 Die 10 goldenen Laborregeln | 263 | |
A3 Das Laborbuch und die finale Arbeit | 264 | |
Verzeichnis der Maps, Protokolle, E-Docs, | ||
Tabellen und Abbildungen | 266 | |
Abkürzungsverzeichnis | 268 | |
Quellenverzeichnis | 28 | |
Register | 29 | |
Alle E-Docs finden Sie im Internet unter http://www.utb-mehr-wissen.de | ||
Register
2-D-Gelelektrophorese 209, 236 3'-OH-Ende 14,81,83,87,98,102,
107,251 3'UTR 22,251 5'-P-Ende 113,116 5'UTR 22 6xHis-Tag 142f., 19 3f.
A-Tailing 84,121, 125,
Acrylamid 201, 203, 214,f.
Adapterprimer 115, 251f.
Adenin 12ff., 21
Adenoviren 129,154f.
Agarosegel 61, 66, 74f., 78, 81, 84, 91,
93, 102, 123, 125, 157ff., 165, 167f.,
197, 204, 246, 253f.
Agarplatten 44ff., 49, 69, 99, 119, 264
Agglutinationstest 224, 239
Agrobacterium tumefaciens 94, 129,
15lf., E-Doc 6-3
Alkalische Phosphatase 56,145, 227f.,
231, 237, E-Doc 10-2
Aminosäuren 12,16ff., 22ff., 44, 49, 75, 78, 89, 133, 141ff., 175, 186, 199f., 206ff., 220, 229, 250
- kanonische 24
- proteinogene 23f.
Aminosäuresequenz 18,89,229,250
Ammoniumacetat 63,169
Ammoniumsulfat 173,179ff., 189,
206,221
Ammoniumsulfatfällung 179,182, 184
Ampholyte 22,197,208
Ampicillin 42, 48f., 133f., 138,149
Annealing 81, 88ff.
Annealing-Temperatur 84, 88ff., 102
Antibiotika 44, 47ff., 119,130, 133
Antigen 218ff., 259ff.
Antikörper 9, 42f., 142ff., 153ff., 180, 196, 211, 213,217, 59, 165, 171, 182ff., 187ff., 194, 218ff., 254f., 255, 258f., 264
- Fänger-A. 233f., 241
- Monoklonale A. 221
- Polyklonale A. 218, 221, 225ff., 238
- rekombinante A. 146, 218, 220f., 258, E-Doc 10-1
Ausgangs-DNA (=Template DNA) 80ff.,
93ff., lOOff., 113, 119, 121, 147,
259f.
Autoklavieren 36, 43ff., 56, 67,72f.,
262f.
ß-Galaktosidase 133ff., 143
BAC 129, 148ff.
BCA-Test 33,186ff., 206
Bibliothek (DNA-, Gen-, Phagen) 222, 257f., E-Doc 11-4
Bioinformatik 244, 248ff.
Biotin 142,228,254
BLAST 248f., E-Doc 11-2
Blau-Weiß-Screening 120,123,133ff.,
139, 143, 149
Blocklösung 213, 225f., 231ff., 237, 242
Blotto 226, 232, 234ff.
Blue Native PAGE PAGE
Blunt Ends stumpfe Enden Bradford-Test 186ff., 197,178f., 206
Bromphenolblau 162,164, 199f., 205
BSA —> Rinderserumalbumin Bunsenbrenner 44f., 262
CAAT-Box 20
Calf Intestine Alkaline Phosphatase
(CIAP) 116
Capture Phase 173,233
Carbenicillin 42,48
ccc-DNA 132
CDNA 21, 72ff., 96ff., 119f., 128, 146,
220, 249, 25Iff.
CDNA-Bank 71, 73, 97, 253,
E-DOC 11-4
Chaotrope Salze 54, 59, 65f., 72, 125,
169, 179f., E-Doc 8-2
Chloramphenicol 45, 48f., 145, 149, 151
Chloroform 54, 56, 60f., 66, 69f., 72, 167
Chromatin Immunopräzipitation (ChIP) 224
Chromatogramm
- Protein 183, 265, E-Doc 8-3
- DNA 245ff.
Chromatographie 74,172f., 182ff., 193ff., 217ff., 226, E-Doc 8-4
- Affinitäts-C. 184ff., 219, 221, 237f.
- Gelfiltrations-C. (SEC) 184, 215
- Hydrophobe Interaktionschromato- graphie (HIC) 184
- Immunoaffinitäts.-C. 237f.
- lonenaustausch-C. (IEX) 184,221
- Metallchelatchromatographie
(IMAC) 194f.
Cl-Methode (s.a. PCI) 60f., 69
codierender Strang 18
codogener Strang 18
Codon 16f., 24, 89, 141, 144, 250f., 257
Codon-Optimierung 144, 257
Codon-Usage (Tabellen) 251,257
Cofaktor 26, 57,176
Coomassie Brilliant Blue 186, 206ff.
Coomassiefärbung 191,196f., 205,
206ff., 236
Cosmid 129, 148f
CTAB 58f., 64f., 69, 71, 125, 169, E-Doc 3-1
Cy3, Cy5 254ff.
Cytosin 12ff.
Dam-Methylase 111, 112f., 126, 260
dcm-Methylase 112f., 126
DEPC (Diethylpyrocarbonat) 56, 72f., 98
Desoxynukleotid (dNTP) 13, 63, 80f., 86f., 98, 102, 123, 147, 244f., 254
Desoxyribonukleinsäure (DNA) 12
Dialyse 42, 66,181f., 215
Didesoxynukleotid (ddNTP) 244f.
Diethylpyrocarbonat -> DEPC
Digoxygenin 254
Dimethylsulfoxid 49, 86,102, 167, 175
Display Verfahren Phage Display Disulfid-lsomerase 141,193
Dithiothreitol (DTT) 58f., 69f., 98, 111,
115, 176, 178, 189, 199, 214
DMSO Dimethylsulfoxid
DNA-Chips 99, 255f.
DNA-Microarray 71f., 99, 244, 253ff.
DNA-Polymerase —> Polymerase DNA-Sequenzierung -> Sequenzierung DNase 55f., 58f., 105, 175
DNase I 51,73
dNTPs —>• Desoxynukleotid Dot Blot 211
Dpnl 107f., 113, 259
Dpnl-Mutagenese —> Mutagenese
Drigalskispatel 44f., 119, 212f.,
dsRED 144f.
Durchflussphotometer 183,186
Durchflusszytometrie 240
EDTA 55, 57f., 66, 68ff., 78, 84, 86,
101, 16 If., 182, 189
EDTA-Blut 70
Einschlusskörperchen 142,192
Elektrokompetente Zellen 117f., 128
Elektroporation 117ff., 150f.
ELISA 9, 34, 143, 218, 224, 226, 230ff.,
240f.
- kompetitiver ELISA 233ff.
- Sandwich ELISA 233f., 241
Elongation 80, 83, 249
Episom 49,130,133,150
Epitop 218, 22Of., 223, 229f., 233f.
Escherichia coli 30, 45ff., 49, 51f., 59,
66, 68, 83, 101, 105, 112, 117, 119, 126, 129f., 13 6f., 139ff., 143, 147ff., 154ff., 176, 190ff., 222, 246, 257, 259f., E-Doc 2-7
EST-Bank 97f., E-Doc 11-4
Ethanolfällung 56, 61ff., 68f., 73,102,
168, 177, 247
Ethidiumbromid 132,162,164ff., 262
Exon 20f., 97
Exonuklease 55f., 84f., 100, 124, 251
ExoSAP-IT 116, 247, E-Doc 5-2
Expression
- heterologe E. 9,21,45,97,139, 153, 155, 190ff., 233, 257
- homologe E. 139
Expressionsvektor 110,128f., 130,
139f., 142, 190f., 249
Anhang
Extension Elongation
F Plasmid / F* Plasmid -> Plasmid FACS 240
FASTA 249, E-Doc 11-2
Flag-Tag 142,237
Fluorescein 228,239,254
Fluoreszenzfarbstoff 89,100,145, 196, 224, 227f., 240, 244f., 255ff., E-Doc 9-2
Fluoreszenzmikroskopie 224, 228, 239
Fluoreszenzprotein 144f.
Fluorometer 78, E-Doc 3-5
Flüssiger Stickstoff 49ff., 58, 64, 69,174
Freeze-'n'-Squeeze 166f.
Freeze-Thaw 52
Fusionsprotein 143,155,190, 258f.
Gateway-System 130,137f.
GC-Gehalt 15, 77, 89,102, 254
genomische DNA 52,56,71,80,89,
102, 119, 148, 253f.
Gewebekultur 45, 50,174, 176
GFP (Green Fluorescent Protein)
143ff., 151f., 155
Glasmilch 65, 74
Glucose 47,67,140,189
Glycerin 43, 46, 49,102,112,117,126,
162,199, 204
Glykosylierung 17, 28
Gradientencycler 90, 92
Guanidinsalze 59, 65f., 72, 189
Guanidinthiocyanat (GTC) 56,59,72
Guanin 12ff., 20
m7G-Cap 2Off., 252f.
Hairpin 88f., 123
Harnstoff (Urea) 101,190,192
Heavy chain -> Schwere Kette Hefe -> Saccharomyces Heidelberger Kurve 223
High-Copy-Plasmid Plasmid
Hitzeschock-Transformation 117,
119f., 126,173f.
Homogenisation 37, 50, 52, 55f., 58f.,
71f., 74, 174ff., 185
Homogenisationspuffer 50f., 55, 58,
69f., 176, 178,199
Hybridisierung 81,158, 167f., 244,
253ff.
Hybridoma 154f., 218, 221
Hypochromer Effekt 15,77
Immunfärbung 9, 40f., 143,189, 21 Off., 224ff„ 235ff., 239ff„ 255, 265
Immunfluoreszenz 224,226,239
Immunfluoreszenz-Mikroskopie 228
Immunisierung 221
Immunglobulin Antikörper Immunogen 219,221
Immunpräzipitation 219,223f., 227
Inclusion Bodies -> Einschlußkörper- chen
Inkompatibilitätsgruppe 130
Inkubationsschüttler 40f., 46,191
Intron 20f., 97, 144,152,156
IPTG 134ff., 140, 142, 190f.
Isoelektrische Fokussierung 196f.,
208f.
Isoelektrischer Punkt 22, 24,181, 197,
208ff.
Isopropanol 64,68,70,73,169
Isoschizomer 109f., 112
Kanamycin 48f., 138,151,155
Kapillarelektrophorese 244f.
Kit 59, 66, 71, 73f., 84, 136, 146, 164, 166f., 189, 194, 233, 246f., 253, 259, E-DOC 3-4
Klonierungsvektor 129ff., 148ff.
Knockout-Maus 153, E-Doc 6-4
kohäsiven Enden 108, 113,119,129
kompetente Zellen (Ca2+) 117, 126,
E-Doc 5-3
Kugelmühle 50f., 174
lacZ 47, 133ff., 139f., 145, 148f., 190f.
lacZ-Promoter-> Promoter LB-Medium 46f., 136,191
Leichte Kette (LC) 219f.
Leupeptin 175,192
Ligase-unabhängige Klonierungs-
systeme (HC) 120,124, Ligase 75, 95,105,113ff„ 120f., 126,
131, 136, 177
Ligation 81,113ff., 117ff., 123, 126
Low-Copy-Plasmid -> Plasmid Low-Melting Agarose 160
Low ry-Test 186,188f.
Luminol 227
Lysozym 51, 59,174,192f.
M13-Phage —> Phagen Magnetic Beads 74,184ff., 193, 226
Magnetrührer 41,179,181f.
Massenspektrometrie 196,210,250,
E-Doc 8-6
Mastermix -> PCR-Mastermix
Matrizen-DNA Ausgangs-DNA
Maus -> Mus musculus Meerrettich Peroxidase (HRP) 227f.,
231, 234, 242, E-Doc 10-2
Methylase 105ff., 112f., 126
Microarray DNA-Microarray Mikropipette 34f., 57, 232, 264
Mikrotiterplatte 37,188, 230ff., 241, 246
Minizentrifuge —> Zentrifuge Mörser 50,58,69,174,177
Multiple Cloning Site (MCS) 133ff.,
139f., 156
Mus musculus (Maus) 153,155,221, 253
Mutagenese 90,100,113, 256, 258f.
- Dpnl-basierte M. 259f.
- Error Prone M. 259
- gerichtete M. (Site-directed M.) 257
- Saturation M. 257
- Scanning M. 257
NanoDrop 76
native PAGE PAGE
Natriumacetat 32, 63ff., 67f., 86,
lOlf., 123, 169, 189
Ncol 109f., 112
Neomycin 48f., 155
Neoschizomer 110
Nitrozellulose 211f., 226, 239
Northern Blot 71ff., 158,167f., 211,
244, 253, 255, E-Doc 7-2
Nuklease 55ff., 70, 95,105,107, 126, 147,168
Nukleotid 12ff., 63, 80, 84ff., 90,
108f., 114, 121, 141, 244, 250, 259
Nylonmembran 255
Oberflächensterilisation 45
occ-DNA 132
Oligonukleotid (s.a. Primer) 63, 65, 77,
89, 100, 115, 253f.
One Hybrid System 257
Operon 18f., 148
ori —> Replikationsursprung
PAC 129,148ff.,
PAGE (Polyacrylamidgelelektrophorese)
197ff.
- Blue Native PAGE 208
- native PAGE 196f., 208,
- SDS-PAGE 172f., 178, 181f., 189, 191, 196ff., 205, 208ff., 213f., 218, 236, 242, E-DOC 9-1
Panning 259
Paratop 221, 223, 229f.
PBS (Phosphate-Buffered Saline) 42,
222,226, 231, 234, 236ff.
PCI 56, 6Of., 69,71f., 167
PCR (Polymerase-Kettenreaktion) 8,
31, 36ff., 68, 70, 77, 80, 81ff., 104f.,
113, 115, 119ff., 136ff., 159, 163,
166, 168, 224, 231, 245ff., 250ff.,
259f.
- Error Prone PCR 259
- Gradienten-PCR 90,92
- inkrementelle PCR 92,102
- Kolonie-PCR 82, 84, 99,119f., 123, E-DOC 4-2
- Multiplex-PCR 93f.
- Nested PCR 92f., 102, 251
- Quantitative PCR lOOf., E-Doc 4-3
- RACE-PCR 25Iff.
- RT-PCR 71, 73, 96ff., 100, 168,
25 If.
- Sticky-End PCR 95, E-Doc 4-1
PCR-Puffer 86,91,99
PCR-Mastermix 91, 99f.
pCRScript 12lf., 134, 251
PEG -> Polyethylenglykol PEG-Fällung 64, 68
Peiß-Sequenz 141,193
Periplasma 48,141,175,190,192f.
pH-Meter 31f.
pH-Indikator 61, 73, 162,199f.
pH-Wert 22, 24, 30, 31ff., 46f., 63, 66f., 78, 176, 178, 181, 201, 208f., 222, 238, 242, E-Doc 2-1
Phagemid 59,129,131, 136,147f., 222, 259
Phagen 36, 45, 59, 64, 105f., 129ff.,
146ff., 222, 258f.
- Phage fl 147,155
- Phage A 114,129,136f., 140, 146ff.,
- Phage M13 129, 146f., 258, E-Doc 11-5
- Phage PI 129,148f.
- Phage T7 191
Phage Display 129,141, 146f. 218,
245, 258f., E-Doc 11.5
Phenol 54, 56, 58, 60f., 70, 72,101,
167, 176
Phenolextraktion PCI
Phenoloxidase 58,174,176
Phosphatpuffer (s.a. PBS) 32, 56, 63,
177f., 222
Photometer 46, 67, 75ff., 100,186,
188, 231
Pipette Mikropipette Pipettenspitze 34ff., 44f., 69f., 99,102
Plasmid 9, 26, 42, 57, 59, 66ff., 74, 81,
89, lOlf., 104f., 118ff., 124, 129ff.,
138ff., 147ff., 163, 246, 253, 259f.
- 2p Plasmid 150
- binäres Plasmid 151f.
- Broad Range Plasmid 147,152
- Centromer-haltige Plasmide 150
- Episomale P. 150
- Expressions-P. 110, 130,139f.,
190f.
- F Plasmid 129ff., 148f.
- F' Plasmid 133ff., 140, 148
- Helferplasmid 151
- High Copy P. 130, 133
- Integrative P. 150
- Klonierungs-P 129ff. 132ff., 139, 147,151
- Low Copy P. 130, 139, 246
- Ti-Plasmid 151f.
Plasmidisolationskit 69, 247
Plasmidpräparation 59, 66ff., 102,
112, 163, 191, 246f.
PMSF 175, 192, 197
Polishing Phase 173,182
PolyA+-RNA 22, 61, 71, 97f., 119, 185,
251, E-Doc 3-3
Polyacrylamidgelelektrophorese
PAGE
Polyadenylierung 21f., 74
Polyadenylierungssignal 21, 152,
155f., 251
polycistronisch 19
Polyethylenglykol (PEG) 61, 64, 68,
181f.
Polymerase 18
- DNA-P. 18, 56, 73, 80ff., 83f., 95ff., 121, 123f., 147
- Proofreading DNA-P. 84f., 120f., 123
- reverse DNA-P. reverse Transkrip- tase
- RNA-abhängige DNA-P. 97
- RNA-P. 18ff., 140,191
- Taq-DNA-P. 56, 83f., 121f.
- T7-RNA-P. 140, 19 Of.
- Tth P. 97
Polymerase-Kettenreaktion -> PCR
Polynukleotid Adenylyltransferase 56,
E-DOC 5-5
Polyphenol 57f.,70, 102, 176
Prä hybridisierung 255
Primer 80f., 83f„ 87ff., 119ff., 132, 134, 138, 140, 149, 166, 168, 245ff., 249ff., 259
- Adapterprimer 251f.
- degenerierte P. 87, 89f., 92,119,
2 5 Of.
- Hexamer-P. 97,99
- modifizierte P. 89
- nested Primer 93
- Oligo-dT-Primer (= oligio-dT18.22VN- Primer) 98, 251f., 252
- Primerdimer 89,96,102,123
- Sequenzierprimer 244ff.
- Smart™-Primer 252f.
Probenpuffer
- für DNA 162f.
- für SDS-PAGE 198f., 214f Promoter 18ff., 47,132ff., 139, 140ff.,
143, 152, 154f., 190f., 257
- 35S-Promoter 152
- Early-SV40-Promoter 155f.
- lacUV5-Promoter 140
- lacZ-Promoter 47,133ff., 139f.,
19 Of.
- nos-Promoter 152
- PL-Promoter 140
- T7-Promoter 139f., 190,191
Promoteranalyse 143,145, 257
Proofreading Polymerase Polymerase Proteaseinhibitor 51,175f., 199
Protease 58,139, 173ff., 192, 194,
214, 220, E-Doc 8-1
Proteinase K 58f., 70
Protein Engineering 258
Proteinsynthese 19, 27f., 49
Pufferkapazität 31f., 168
Purin 12ff.
PVDF-Membran 211ff., 226, 237
Pyrimidin 12ff.
Ouartärstruktur 25f.
RACE 7If., 97, 249f„ 251ff.
rbs -> ribosomale Bindestelle Reaktionsgefäß 31, 35ff., 49, 63, 68f., 74, 9Of., 96, 99f., 124, 166f., 185, 188, 264
Red Safe 165
Reinstwasser 31, 66,118
Reinstwasseranlage 30f., 66
Rekombinase 120, 124,128,136ff.,
- cre-Rekombinase 149
Rekombinase-basierte Klonierung
136ff.
Rekombinase-Site 137f., 149, 156
Rekombination 130,136ff., 150
- homologe R. 150f., 154, 257
- illegitime R. 151
Renaturierung 15, 59, 67, 88
Replikation 13
Replikationsursprung 128, 130, 132ff., 139, 146f., 149ff., 156
- oriColEl 130
- pSa-ori 151f.
- pUC-ori 155
- SV40-ori 150, 155
Reportergen 143f., 152,155, 257
Restriktionsenzym 57, 95f., 105ff.,
119ff., 126, 132f., 136f., 163, 166, 177, 254, 259
Retroviren 12, 17, 96, 129, 154
Reverse Genetik 153,245,257
Reverse Transkriptase 21, 96ff., 119, 253,255
- AMV R.T. 96
- M-MLV R.T. 96, 98
Reverse Transkription 12, 72, 96f.,
119f., 249, 253
Ribonukleinsäuren —>• RNA
Ribosom 19
ribosomale Bindestelle (rbs) 19, 139, 141
Ribozym 16, 18f., 22, 26f., 28, 40, 49
Rinderserumalbumin (BSA) lllf., 187f., 226
- deacetyliertes BSA 102
R-M-System 106, 112
RNA 12ff., 52, 55ff., 63, 65f., 70ff., 85, 87, 96ff., 110, 115, 119f., 139, 146, 158, 167f., 177, 185, 251, 253ff., 257
- hnRNA 2Of.
- mRNA (messenger RNA) 12,16, 18ff., 27, 49, 54, 73, 96f., 99f., 141, 156, 249, 25Iff., 254, 256, 258
- rRNA (ribosomale RNA) 16,18,22,
40, 73, 167f.
- tRNA (Transfer-RNA) 16, 18f., 22, 49, 73, 257
RNA-Ligase 252
RNA-Polymerase —> Polymerase RNA-Sonde 139
Anhang
RNase 25, 56, 67ff., 98
- RNase A 68
- RNase H 69,96,98
- RNase Block 98
RNase-freie DNase 73
Rolling Circle 147f.
Rotationsmischer 40f.
Rotor 37ff., 41
Saccharomyces cerevisiae (Hefe) 59,
129, 148, 150f., 253, 257, E-Doc 6-2
Sammelgel 202f., 215
Säuger-Zellkulturen 150,153ff., 257
scFv —> Antikörper, rekombinant Scherkraft 40f., 41, 52, 55ff„ 71,126, 131
Schmelztemperatur 15, 77, 88f., 255
Schüttler 40f., 46, 70,119, 191
Schwere Kette (HC) 219f., 258
Screening (s.a. Biau-Weiß-Screening)
99, 120, 134, 258
SDS (Natriumdodecylsulfat) 30,42,
58f., 63, 67f., 70ff., 101, 178, 189,
197, 199f., 203ff., 208, 212, 214f.
SDS-Gelelektrophorese PAGE
SDS-PAGE PAGE
SDS-Laufpuffer 204,215
SDS-Probenpuffer 198
Sekundärstruktur 24
Selbstligation 115f.
Selektion 47,128,133,152,258
Selektionsverfahren 258
Self-Priming 89
Semi-Dry Blot 211ff., 216
Sequenzierung
- DNA-S. 66, 88, 132, 134, 146, 244ff., E-DOC 11-1
- Protein-S. 252, E-Doc 8-7
Shine-Dalgarno-Sequenz 18, 139,141
Shrimp Alkaline Phosphatase 141
Shuttle-Vektor 129,147f., 150f., 154ff.
Silberfärbung 206ff., 214
Silika-Partikel 65f., 91,121,123,166f.
Southern Blot 113,158,211,244,
253ff., E-Doc 7-1
Speed-Vac 41f., 57, 62, 64, 68,101,198
Speedcycler 90
SpektralphotometerPhotometer Spheroblasten 150
Spleißen 20f.
- alternatives S. 20f Srfl 110,121f., 134
Srfl-basierte Verfahren 120
ssDNA 14f., 75, 77, 114, 129, 146f.,
245, 254
Stain G 165f.
Star-Aktivität Ulf., 126
Startcodon 17,19, 21f., 110, 141
Sterilbank 31, 44f., 135f.
Sticky ends —> kohäsive Enden Stoppcodon 17,19, 21f., 110,141
Streptavidin 142, 228, 254
Stuffer-DNA 146,149
stumpfe Enden (blunt ends) 105,108,
113ff., 119, 121f., 124, 136,251
supercoiled DNA 74,125,131f., 163
SYBR Green 100
T7-Promoter Promoter
T7-RNA-Polymerase —> Polymerase
Tag-Sequenzen 98,139f., 141,142ff.
145, 184, 190, 192ff.
T-DNA 15 Iff.
T-Antigen 155f.
T4-Ligase Ligase
TA-Klonierung 80, 84,120f., 125, 251
TAE-Puffer 42, 56ff., 160ff., 164, 167ff.
Taq-Polymerase Polymerase TATA-Box 20
TBE-Puffer 56ff., 161
TBS-Puffer 222,238
TCA-Fällung 181,198,200,213
TE-Puffer 57, 62, 65f., 68ff., 75, 86, 91, 101, 167
Template-DNA -> Ausgangs-DNA
Tertiärstruktur 25,163,179
Tetracyclin 48f.
Thermocycler 80f., 83, 90ff., 100,115
Thymin 12ff.
tierische Zellkultur Säuger-Zellkultur Tissue Print 239
TOPO-Cloning 125
Topoisomerase I 124f., 131f., 137
Transduktion 129, 156
Transfektion 156
Transkriptionsfaktoren 20f.
Translation 12,16ff., 19f., 22, 24, 26f.,
49, 56, 85, 141, 257
Trenngel 202f., 215
Transformation 8,94,99,105,117, 117ff., 123f., 126, 133, 144, 147, 259
- von Hefen 151
- von Pflanzen 129,151f.
- von Säugerzellen 153ff.
Transkription 8,12,16ff., 26, 80, 255
Tris-Puffer (s.a. TE-, TBE- und TBS-
Puffer) 33,73
Trockeneis 51, 64
TY-Medium 46f., 117,191
Ultrafiltration 41,182
Ultraschall 50, 51f., 174,192f., 224
Ultrazentrifuge Zentrifuge
Uracil 12f., 15ff.
UV-Crosslinking 255
UV-Tisch 164ff., 255
UV-Photometer Photometer
Vektoren (s.a. Plasmid) 9, 80, 95, 97, 104f., 114ff., 119ff., 128ff., 140f., 144f., 147f., 150f., 154ff. , 166, 245
- binärer V. 150ff.
- BAC-V. 148
- Entry-V. 13 7f.
- Expressions-V. 110,128f., 130, 139f., 142, 190f., 249
- Klonierungs.-V. 129ff., 148ff.
- PAC-V. 148f.
- Replacement-V. 146
- Shuttle-V. 129, 147f., 154ff.,
- Suicide-V. 122, 136
- T-Vektor 121
Vektorkarte 141
Vortexer 40f., 49, 57, 62, 71
Waage 33
Wasser 12, 30ff., 41f., 45, 60, 71, 73, 117, 161, 168, 174,180f., 193, 236
Wasserbad 51, 69, 112,117,166,198f.
Wasserkontrolle 83, 93f., 101f.
Wasserstoffbrücke 14f., 25, 77, 87, 229
Wasserstoffperoxid 227
Western Blot 44, 203, 208, 211ff., 218,
224, 226, 228, 235f., 240, 242, 255
Wet Blot 211,214,216
Wöbbel 16, 90, 250f.
Xbal 109f., 126
X-Gal 133ff., 145
Xylencyanol 162
YAC 56,129,148,150
Zentrifuge 36ff., 42, 51, 63f., 167 178ff., 192, 198, 236, 262, 265
- Kühlzentrifuge 37ff.
- Minizentrifuge 38f., 91
- Ultrazentrifuge 39
Zwitterion 22, 24, 178
Zymolase 59